WARP-LC

Features for LC-MALDI data acquisition

• Automated calculation of LC-MS Compounds
• Auto-MS/MS acquisition – determination for each Compound of the MALDI target position that is most likely to yield good MS/MS data
• Feedback: automated MS/MS acquisition based on identification and quantitation results

Features for Quantitation based on labels

• applicable to ESI and MALDI data
• Analysis of MS/MS spectra for isobaric labels
• Detemination of pairs / n-tuplets for non-isobaric label (SILAC, SILE, e.g. ICPL)
• calculation of ratios on peptide and protein level
• automatic detection of outliers, statistics